MRI T1 data processing using FreeSurfer
Wanna know how to use Python and FreeSurfer (recon-all) to do the T1 data processing and get the brain features (e.g., Volume, Surface, Thickness)? You can find the scripts and tutorial here. Charting the brain structure deviations in psychiatric disorders across lifespan using normative modeling
Normative modeling is like making a map of what is “typical” for the brain so we can see how an individual brain compares. It’s powerful because instead of just comparing groups (e.g., “patients vs. healthy”), it lets us understand each person’s brain in the context of typical development and variation. The PCN toolkit will be used in the tutorial here in Python. 100 R Programming Tips for Psychologists: A Beginner-Friendly Guide
This book is written during my PhD to summarize all codes which are useful and replicable. It is not only for psychologists, but almost for everyone who is doing social sciences or medical sciences. Currently, this book is not available. But you can get some open access materials offered by me and my colleague, e.g., CNC R course. Psychopathogical Network Analysis
This is the tutorial for psychopathological network analysis. The related packages will be used such as "bootnet", "qgrap", and "networktools".Mutilevel modeling/linear mixed-effect model
